Disease: Liver carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2230229
TNFRSF10A
0.807 0.120 8 23191779 missense variant C/T snv 0.88 0.86 8
rs1047972
AURKA
0.716 0.240 20 56386407 missense variant T/C snv 0.85 0.84 19
rs132770
DESI1 ; XRCC6
0.752 0.320 22 41621260 5 prime UTR variant A/G snv 0.83 14
rs2057482
HIF1A-AS2 ; HIF1A-AS3 ; HIF1A
0.701 0.440 14 61747130 3 prime UTR variant T/C snv 0.84 0.80 21
rs3757441
EZH2
0.752 0.200 7 148827660 intron variant C/T snv 0.80 12
rs20541
IL13 ; TH2LCRR
0.585 0.720 5 132660272 missense variant A/G snv 0.72 0.77 52
rs751402
ERCC5 ; BIVM-ERCC5
0.724 0.360 13 102845848 5 prime UTR variant A/G snv 0.76 15
rs1800797
IL6 ; IL6-AS1 ; STEAP1B
0.605 0.800 7 22726602 non coding transcript exon variant A/G snv 0.72 43
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 108
rs1800872
IL19 ; IL10
0.495 0.840 1 206773062 5 prime UTR variant T/G snv 0.69 119
rs132774
XRCC6
0.776 0.280 22 41635949 intron variant C/G snv 0.69 9
rs5751129
XRCC6 ; DESI1
0.752 0.320 22 41619761 intron variant C/T snv 0.69 14
rs228729
PER3
0.827 0.120 1 7785635 intron variant T/C snv 0.69 0.69 5
rs4796793
STAT3
0.716 0.320 17 42390192 upstream gene variant G/C snv 0.67 16
rs2228001
XPC
0.570 0.480 3 14145949 missense variant G/T snv 0.63 0.65 60
rs7248320
CARD8 ; CARD8-AS1
0.776 0.160 19 48256972 non coding transcript exon variant G/A snv 0.65 8
rs1128503
ABCB1
0.564 0.760 7 87550285 synonymous variant A/G snv 0.54 0.63 64
rs2233679
PIN1 ; LOC100996288
0.763 0.360 19 9834678 splice region variant C/T snv 0.59 11
rs873601
BIVM-ERCC5 ; ERCC5
0.677 0.360 13 102875987 3 prime UTR variant G/A snv 0.59 25
rs1360485
HMGB1
0.742 0.320 13 30457747 3 prime UTR variant C/T snv 0.58 16
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs10514231
ATG10
0.807 0.160 5 82011593 intron variant C/T snv 0.56 6
rs11615
ERCC1
0.572 0.640 19 45420395 synonymous variant A/G snv 0.50 0.55 62